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Critical bug in version 0.6.2
There is a critical bug in version 0.6.2 which leads to a lot of false library entries. This slows down the obfuscation process tremendously and may lead to failure.
A fixed version will be available shortly. For now, please, don’t update to version 0.6.2.
Sorry for the trouble.

Comments
I filed the bug
The bug is filed at the bug tracker: https://sourceforge.net/tracker2/?func=detail&aid=2499666&group_id=20250...
This bug is fixed
We just published version 0.6.3 – this release fixes the bug introduced in release 0.6.2.
Sorry for the trouble!